rs11750563 chr5:125291665 C>T

Sequence
gccaggtttttcgtgttttcttcc[C/T]agcagtgccctggaaaactgagcc
ASB in cell types
liver
ASB for transcription factors
HNF4A_HUMAN SP1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN 2.98 n/a 6.1·10-41.00 1.00 n/a No Hit
SP1_HUMAN 2.70 -2.57 7.7·10-31.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  fasting insulin,  homa-ir,  neuroblastoma (brain cancer),  rheumatoid arthritis

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