rs117516928 chr17:82213505 C>T
- Sequence
acatcctcagaaaaaggcacgtgt[C/T]cgtatccatctgcggatggatgaa
- ASB in cell types
- CD14+ monocytes breast tumor
- ASB for transcription factors
- STAT1_HUMAN USF1_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.61 | n/a | 2.00 | n/a | No Hit | |||
| USF1_HUMAN | 2.06 | -1.05 | 2.00 | -0.87 | Weak Concordant | |||
| ESR1_HUMAN | 2.34 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
