rs11751782 chr6:38639389 A>C

Sequence
cagaggctggccagggcaggggag[A/C]tgagggccccagcagtcccaaact
ASB in cell types
primary B-CLL cells K562 (myelogenous leukemia) 22RV1 (prostate carcinoma) neural cell
ASB for transcription factors
BRD4_HUMAN ANDR_HUMAN MXI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 3.17 n/a 3.1·10-31.00 3.00 n/a n/a
ANDR_HUMAN 2.73 n/a 0.021.00 2.00 n/a No Hit
MXI1_HUMAN -2.15 2.42 1.000.04 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Aorta,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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