rs11752118 chr6:44223517 A>G
- Sequence
ggggcggggccgcgggcgtcgggg[A/G]ggtggcagtgggcgcagggcgggg
- ASB in cell types
- GM12891 (male B- cells lymphoblastoid cell line) GM01310 ( Transformed lymphovlasoid cell line )
- ASB for transcription factors
- CTCF_HUMAN AHR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.50 | -0.37 | 1.47 | -1.26 | Weak Concordant | |||
| AHR_HUMAN | 2.17 | -1.70 | 1.00 | n/a | No Hit |
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Motif analysis
