rs117523617 chr16:84599987 G>A
- Sequence
gaaatgtcttcttgccaccaaaga[G/A]gaaggagggctcagtggccgccca
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) MDM(monocyte derived macrophages)
- ASB for transcription factors
- SPI1_HUMAN ETS1_HUMAN SMCA4_HUMAN FLI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.31 | -0.62 | 1.11 | -2.20 | Concordant | |||
| ETS1_HUMAN | 2.85 | -2.54 | 1.00 | -3.67 | Concordant | |||
| SMCA4_HUMAN | 1.80 | 0.11 | 1.00 | n/a | n/a | |||
| FLI1_HUMAN | 1.93 | -0.65 | 1.00 | -5.87 | Concordant |
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Motif analysis
