rs117524993 chr10:133261571 C>A
- Sequence
acgtgcgcatcgggcggggtactg[C/A]ggcgcgtgtgggccgtgagccccg
- ASB in cell types
- SH-EP-NMYCER
- ASB for transcription factors
- MYCN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MYCN_HUMAN | 1.93 | -0.43 | 1.00 | 2.11 | Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Thyroid