rs11752772 chr6:20791280 A>G
- Sequence
tttaatcagcacaatgcctggcac[A/G]tagtatctgttcaatatatagtat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MTA2_HUMAN MEF2B_HUMAN ARNT_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | n/a | 3.26 | 1.50 | n/a | n/a | |||
| MEF2B_HUMAN | -2.53 | 2.87 | 1.00 | n/a | No Hit | |||
| ARNT_HUMAN | -3.17 | 3.03 | 1.00 | 6.27 | Concordant | |||
| COT1_HUMAN | -2.52 | 2.62 | 1.00 | n/a | No Hit |
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Motif analysis
