rs117532831 chr12:111599646 G>A
- Sequence
ggccgggagggacacgtgaggagc[G/A]ggcggcgcgctgggttgctttctc
- ASB in cell types
- 22RV1 (prostate carcinoma) fetal bone marrow-derived mononuclear cells MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- ANDR_HUMAN CDK9_HUMAN KMT2A_HUMAN FLI1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.09 | n/a | 2.50 | n/a | No Hit | |||
| CDK9_HUMAN | -0.08 | 1.96 | 1.00 | n/a | n/a | |||
| KMT2A_HUMAN | 2.81 | n/a | 1.50 | -1.60 | Weak Concordant | |||
| FLI1_HUMAN | -0.87 | 1.84 | 2.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial