rs11754013 chr6:25369972 G>T
- Sequence
tggctgattccttttcctaatgac[G/T]gtgcttctactcttggccttttgc
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.74 | -4.97 | 2.00 | 3.10 | Discordant |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, diastolic blood pressure (dbp), ldl cholesterol, systolic blood pressure (sbp), triglycerides, waist hip ratio