rs11754209 chr6:137218742 G>C
- Sequence
aatgtccccttaggcaatttcttc[G/C]ggcagtagaaacccagacaaaccc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ELF1_HUMAN NR2C1_HUMAN SRF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | -2.04 | 2.37 | 1.00 | 4.56 | Concordant | |||
| NR2C1_HUMAN | -2.14 | 2.54 | 1.00 | n/a | No Hit | |||
| SRF_HUMAN | -1.60 | 1.97 | 1.00 | n/a | No Hit |
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Motif analysis
