rs11755998 chr6:81754073 G>T
- Sequence
gtgacaacgccgccccctcccggt[G/T]ccctgccgagctgcgtcccaaaat
- ASB in cell types
- BJ1-hTERT (Human fibroblast telomerase immortalized cell line) ID00014 (lymphoblastoid cell, DiGeorge syndrome) A549 (lung carcinoma) Th1-cells
- ASB for transcription factors
- STAG1_HUMAN EGR1_HUMAN TBX21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.23 | -1.23 | 1.00 | n/a | n/a | |||
| EGR1_HUMAN | -1.09 | 1.55 | 1.00 | n/a | No Hit | |||
| TBX21_HUMAN | 1.60 | -0.87 | 1.00 | n/a | No Hit |
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