rs117577413 chr20:50735118 T>C

Sequence
gagccgagattgcgccactgcact[T/C]cagagcctgggtgacagagggaga
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ZN217_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN217_HUMAN 3.06 n/a 0.011.00 4.00 n/a n/a
FOXA1_HUMAN 2.21 n/a 0.011.00 4.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum

Download