rs11758031 chr6:33716581 G>A

Sequence
tgacccgcttgtcaatcacccagc[G/A]ccattcctagcacattaataggca
ASB in cell types
breast tumor Ishikawa (endometrial adenocarcinoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
ESR1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 3.33 -0.15 5.4·10-41.00 2.00 n/a No Hit
ANDR_HUMAN 1.94 n/a 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI eosinophil counts
GRASP body mass index (bmi),  college completion,  hdl cholesterol,  years of education
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Muscle_Skeletal,  Pancreas,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Thyroid

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