rs11758213 chr6:137661807 A>G
- Sequence
gggatgtccccaggaaaacatgct[A/G]gccactaggtggagccgggagata
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line) GM19239 (male B-cells lymphoblastoid cell line) IPSC-derived bipolar neuron
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.20 | 1.41 | 1.33 | 1.95 | Weak Concordant | |||
| STAG1_HUMAN | 0.35 | 1.61 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | -0.47 | 1.25 | 1.28 | n/a | n/a |
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Motif analysis
