rs117599683 chr12:12986217 T>G
- Sequence
cattcactgtcctctggagggccc[T/G]gcagtcacctggcctaggactaca
- ASB in cell types
- GM18526 (B – cells Lymphoblastoid Cell Lines) KMS-11 (Plasma cell myeloma)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -1.89 | 2.25 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.66 | 1.75 | 1.62 | -1.67 | Weak Discordant |
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Motif analysis
