rs117612899 chr14:93906923 G>A
- Sequence
gagcaattccaagggctccctctc[G/A]tggccatttgaggccaaagctgag
- ASB in cell types
- Kelly (neuroblastoma) FT282 (normal human fallopian tube tissue) glioblastoma cells VCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN CTCFL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.14 | 0.14 | 1.38 | -5.22 | Concordant | |||
| CTCFL_HUMAN | 1.93 | -0.49 | 1.00 | -4.37 | Concordant |
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Motif analysis
