rs117642224 chr1:112936229 C>T
- Sequence
taattctaacttagagaaggcagc[C/T]gggggcagtggctcatgcctgtaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- GATA3_HUMAN P53_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | 2.88 | -5.39 | 2.00 | n/a | No Hit | |||
| P53_HUMAN | 2.91 | -4.86 | 1.50 | n/a | No Hit |
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