rs11765436 chr7:50304481 T>A
- Sequence
ccacccgccgctctgggcggcagc[T/A]ggtggcaacgcaagggcgcggcgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 2588 (Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.17 | 1.60 | 1.15 | -1.33 | Weak Discordant | |||
| STAG1_HUMAN | -1.03 | 1.76 | 1.07 | n/a | n/a |
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Motif analysis
