rs11767113 chr7:88102019 C>G

Sequence
accttgactttgtagcaggcatac[C/G]tgggtgtggatgatctctctcagt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
TBX21_HUMAN IKZF2_HUMAN IKZF1_HUMAN NFAC3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX21_HUMAN n/a 3.56 1.002.5·10-5 1.33 n/a No Hit
IKZF2_HUMAN -1.13 2.78 1.002.7·10-4 1.00 n/a n/a
IKZF1_HUMAN n/a 2.88 1.003.7·10-3 1.50 n/a n/a
NFAC3_HUMAN n/a 2.76 1.007.9·10-3 1.00 n/a No Hit
SKIL_HUMAN -2.60 2.70 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP systolic blood pressure (sbp),  triglycerides
GTEx eQTL Artery_Tibial,  Heart_Left_Ventricle,  Muscle_Skeletal,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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