rs11767162 chr7:2477839 C>T
- Sequence
gaggatgagcgtgcctgccctccc[C/T]ggccacatccgcgtccccatcctg
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) 22RV1 (prostate carcinoma) testis
- ASB for transcription factors
- ETS1_HUMAN FLI1_HUMAN CDN1B_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETS1_HUMAN | -1.64 | 2.62 | 1.00 | n/a | No Hit | |||
| FLI1_HUMAN | -1.34 | 2.74 | 1.00 | 1.58 | Weak Concordant | |||
| CDN1B_HUMAN | -0.51 | 1.36 | 2.29 | n/a | n/a | |||
| ANDR_HUMAN | 2.28 | -1.26 | 2.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg