rs11767463 chr7:97872328 A>G
- Sequence
ggatgctggcgcggggcgcagggc[A/G]cggggcgcaggacccggctcacct
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) HeLa (cervical adenocarcinoma) Kelly (neuroblastoma)
- ASB for transcription factors
- RFOX2_HUMAN INT11_HUMAN MYCN_HUMAN ETV5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFOX2_HUMAN | 3.50 | -3.68 | 1.38 | n/a | n/a | |||
| INT11_HUMAN | 2.16 | -0.47 | 2.00 | n/a | n/a | |||
| MYCN_HUMAN | 2.50 | -0.53 | 1.33 | 3.64 | Discordant | |||
| ETV5_HUMAN | 2.47 | n/a | 1.00 | n/a | No Hit | |||
| TP53B_HUMAN | 2.42 | -4.42 | 1.50 | n/a | n/a |
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Motif analysis
