rs117676231 chr19:49074152 G>A
- Sequence
agtcctggtcgccctctgctgggg[G/A]tgtggagagaggtaggtactaagg
- ASB in cell types
- glioblastoma cells HEK293 (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.13 | 1.40 | 1.45 | 0.44 | Weak Concordant |
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Motif analysis
