rs11767691 chr7:90709536 C>T

Sequence
acagtgtgttgtgaattgccttga[C/T]agcatatgcacggttactttggct
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) neural cell
ASB for transcription factors
EP300_HUMAN STAG1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EP300_HUMAN 2.25 -1.83 0.041.00 1.00 n/a n/a
STAG1_HUMAN 0.54 1.40 0.990.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  fasting blood glucose,  triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Thyroid

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