rs11769379 chr7:116306349 T>C

Sequence
aagcttacaaatcaactgtaaata[T/C]gatgttagtatttctgagcacata
ASB in cell types
HepG2 (hepatoblastoma) A549 (lung carcinoma)
ASB for transcription factors
CEBPG_HUMAN JUN_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPG_HUMAN n/a 3.47 1.001.5·10-4 1.50 n/a No Hit
JUN_HUMAN n/a 2.55 1.000.03 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Nerve_Tibial,  Testis

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