rs11769559 chr7:143414203 T>C
- Sequence
tctccatctcctgacctcgtgatc[T/C]gcccgcctcggcctcccaaagtgc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF3_HUMAN ARI1B_HUMAN MITF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | n/a | 2.86 | 1.25 | n/a | No Hit | |||
| ARI1B_HUMAN | -4.61 | 2.81 | 1.50 | n/a | n/a | |||
| MITF_HUMAN | -2.10 | 2.41 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Esophagus_Mucosa, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Spleen, Whole_Blood