rs117697841 chr17:44130179 G>A

Sequence
gagtttctacaagcaagaactggg[G/A]ttcaaacccaggtttcagtggctg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZNF34_HUMAN ZN781_HUMAN ZBT8A_HUMAN ZBT11_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZNF34_HUMAN n/a 3.40 1.002.5·10-12 1.50 n/a No Hit
ZN781_HUMAN n/a 2.81 1.001.0·10-5 2.00 n/a n/a
ZBT8A_HUMAN n/a 3.83 1.001.6·10-4 2.00 n/a n/a
ZBT11_HUMAN n/a 3.35 1.005.7·10-4 2.00 n/a n/a
ZN577_HUMAN -2.52 2.92 1.007.0·10-4 1.00 n/a No Hit
Items per page:
1 – 5 of 9

Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

Download