rs117706421 chr1:153353783 G>T
- Sequence
tgacttcacctgcaggtggagcaa[G/T]taagccaggagacagtgtccaggg
- ASB in cell types
- THP-1 (acute monocytic leukemia) GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.50 | -0.61 | 1.62 | 0.39 | Weak Discordant | |||
| RAD21_HUMAN | 1.92 | n/a | 2.00 | n/a | n/a |
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Motif analysis
