rs11770899 chr7:1939789 C>T
- Sequence
taagcctccagcctcccaagagct[C/T]aggctgctgtgggccactgctctc
- ASB in cell types
- primary B-CLL cells HT1080 (fibrosarcoma)
- ASB for transcription factors
- BRD4_HUMAN SSRP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 0.00 | 2.00 | 1.67 | n/a | n/a | |||
| SSRP1_HUMAN | 1.77 | -1.21 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Heart_Atrial_Appendage, Spleen, Thyroid, Whole_Blood