rs11771240 chr7:155216759 A>G

Sequence
ccaggataagagctggcggcttct[A/G]tgtctgatctacactctgatggga
ASB in cell types
K562 (myelogenous leukemia) HepG2 (hepatoblastoma)
ASB for transcription factors
RBM25_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN 0.14 1.38 1.000.02 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  ldl cholesterol,  total cholesterol,  triglycerides,  urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Substantia_nigra,  Pancreas,  Skin_Sun_Exposed_Lower_leg

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