rs11772299 chr7:25664227 T>C

Sequence
ctgaggaaaccttagggacgcatg[T/C]cactcaatatttctttttccatgc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ZNF24_HUMAN ARI1B_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZNF24_HUMAN 3.17 -4.28 2.3·10-41.00 2.00 n/a No Hit
ARI1B_HUMAN 2.88 -5.39 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia,  Esophagus_Muscularis,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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