rs11772805 chr7:106421711 T>C
- Sequence
caatctctttgttattcaatttcc[T/C]cttatgctaactgaaaataatact
- ASB in cell types
- 22RV1 (prostate carcinoma) CD14+ monocytes MDM(monocyte derived macrophages) macrophages
- ASB for transcription factors
- ANDR_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.26 | -1.17 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 2.54 | 0.56 | 3.00 | -0.03 | Weak Concordant |
Items per page:
1 – 2 of 2
Motif analysis
Genetic associations
GRASP aortic valve calcium, height, hypertension (early onset hypertension), sporadic creutzfeldt-jakob disease