rs11772852 chr7:30172972 C>G

Sequence
tcctcctggcagggtgtgtgttaa[C/G]ttcagggagcccaagtcattgtaa
ASB in cell types
T47D (invasive ductal carcinoma) breast tumor
ASB for transcription factors
PRGR_HUMAN TCF21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRGR_HUMAN 0.70 1.38 1.001.1·10-4 1.19 n/a No Hit
TCF21_HUMAN 2.13 -1.40 0.051.00 2.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol triglycerides
GTEx eQTL Artery_Aorta Artery_Tibial Breast_Mammary_Tissue Nerve_Tibial

Download