rs117734063 chr12:54571375 C>T
- Sequence
ttcttctttccaatcctgccctct[C/T]caggacagagaatagtagggctct
- ASB in cell types
- neural cell
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.15 | 3.00 | 1.25 | 1.50 | Weak Concordant | |||
| RAD21_HUMAN | -0.21 | 3.56 | 1.25 | n/a | n/a | |||
| SMC3_HUMAN | -2.94 | 3.18 | 1.00 | n/a | n/a |
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Motif analysis
