rs11773707 chr7:157340264 G>C

Sequence
ctcagaaatgattctgttcaaaat[G/C]tggtttggttaaatttgtgcagga
ASB in cell types
neutrophils from periferal blood K562 (myelogenous leukemia) erythroid progenitors hepatocytes
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Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
neutrophils from periferal blood 0.03 2.96 1.002.8·10-6 1.50
K562 (myelogenous leukemia) 0.03 0.46 1.008.2·10-4 1.50
erythroid progenitors 2.79 n/a 5.3·10-31.00 2.00
hepatocytes -0.72 1.41 1.000.01 1.00
CD34+ stem cells-derived erythroblasts -3.86 1.66 1.000.02 2.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta,  Artery_Tibial,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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