rs117745428 chr12:32107291 C>T

Sequence
ccccgccagcttcgcatccatctc[C/T]cccaccccgtaaccccctcctgcc
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZNF2_HUMAN FEZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZNF2_HUMAN -2.15 2.95 1.000.03 2.00 -2.69 Discordant
FEZF1_HUMAN -1.62 2.55 1.000.04 2.00 n/a No Hit
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Motif analysis

ZNF2_HUMAN Discordant
ZNF2_HUMAN pic

Genetic associations

GTEx eQTL Colon_Sigmoid

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