rs11775656 chr8:144332049 A>G
- Sequence
gagtgggggcggggcctgggtctc[A/G]ggggcggggcctgggtctcagggg
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- KLF8_HUMAN ATF2_HUMAN RBM25_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KLF8_HUMAN | 3.12 | n/a | 1.00 | 1.11 | Weak Discordant | |||
| ATF2_HUMAN | 2.38 | n/a | 1.00 | n/a | No Hit | |||
| RBM25_HUMAN | 1.69 | -0.74 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood