rs117777329 chr16:2875048 C>T
- Sequence
gccaggagagggcgcgcgcggact[C/T]agcggccgcccgactgcctcacca
- ASB in cell types
- 22RV1 (prostate carcinoma) D54 (H54, Human glioblastoma) Th1-cells
- ASB for transcription factors
- ANDR_HUMAN TBX21_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.11 | n/a | 2.00 | n/a | No Hit | |||
| TBX21_HUMAN | -0.90 | 1.32 | 1.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.13 | 1.34 | 1.70 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Whole_Blood