rs117835247 chr8:124856993 G>C
- Sequence
tgggaacagcaaagtctggcccaa[G/C]cctgttcagcctgtaccctgcttg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) breast tumor SK-BR-3 (breast adenocarcinoma)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN SNF5_HUMAN ARI1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.15 | 2.31 | 1.94 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.22 | 1.30 | 2.00 | n/a | No Hit | |||
| SNF5_HUMAN | -0.77 | 2.07 | 2.00 | n/a | n/a | |||
| ARI1A_HUMAN | -0.39 | 1.60 | 2.00 | n/a | No Hit | |||
| ETV2_HUMAN | -5.41 | 3.23 | 2.00 | n/a | No Hit |
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