rs117838745 chr12:103401647 C>T
- Sequence
cttctatcccacagggtggcactg[C/T]tcacaatgggaatatagcaagggg
- ASB in cell types
- IMR-5 (Neuroblastoma) epithelial cell of prostate
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -3.73 | 2.33 | 1.50 | n/a | n/a | |||
| CTCF_HUMAN | -1.25 | 1.25 | 1.00 | 0.44 | Weak Concordant |
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Motif analysis
