rs117873302 chr9:80392149 A>G
- Sequence
agtagtgtaggcatttgtaacaca[A/G]taaatatttgtgtgtacatacaaa
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN TBP_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.42 | 1.57 | 1.53 | 2.52 | Concordant | |||
| ANDR_HUMAN | -0.29 | 1.81 | 1.15 | 3.03 | Concordant | |||
| TBP_HUMAN | 0.42 | 2.04 | 1.00 | n/a | No Hit |
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Motif analysis
