rs117880400 chr15:29103866 C>T
- Sequence
accctctcctgcgcgggcgctgcc[C/T]ccggccctcctgccgagccccatc
- ASB in cell types
- T47D (invasive ductal carcinoma) HCT-116 (colon carcinoma) PANC1 (pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.87 | 1.09 | 1.58 | n/a | No Hit | |||
| RAD21_HUMAN | 0.06 | 0.83 | 1.69 | n/a | n/a |
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