rs117945097 chr7:155190585 C>T
- Sequence
gtctgtgacaatcacccccccccc[C/T]ccccgcagcgatttggtgaactgg
- ASB in cell types
- gastrocnemius medialis foreskin keratinocyte HCT-116 (colon carcinoma) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.67 | 2.04 | 1.56 | n/a | No Hit | |||
| RAD21_HUMAN | n/a | 2.37 | 1.33 | n/a | n/a |
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