rs118010236 chr9:110143086 G>A
- Sequence
gaggggccatgctcccaatagtgt[G/A]tgcatgtgtgccctctgctgatgg
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line) GM02630 (Fanconi anemi) GM18951 (B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.86 | 0.22 | 2.75 | n/a | No Hit | |||
| STAG1_HUMAN | 1.83 | -2.07 | 3.12 | n/a | n/a |
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