rs118017936 chr9:136687077 G>C
- Sequence
tccccggagccccggagcggggcg[G/C]gacgggcggggcaggaaggaggga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- P66B_HUMAN ANDR_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| P66B_HUMAN | -2.57 | 2.79 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 1.98 | -0.88 | 2.00 | n/a | No Hit | |||
| BHE40_HUMAN | -2.13 | 2.27 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Heart_Atrial_Appendage, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid