rs118026173 chr13:51849832 A>G

Sequence
aggggcaagtgtcagggttgggaa[A/G]atgcacaacgccacctactggcgc
ASB in cell types
SK-N-SH (neuroblastoma) VCaP (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.09 2.25 1.001.1·10-7 2.29 n/a No Hit
RAD21_HUMAN -1.35 2.26 1.002.4·10-6 1.12 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Transverse Skin_Sun_Exposed_Lower_leg

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