rs118030400 chr12:7229880 T>A

Sequence
ttctgtctaacaagaaaatgcaca[T/A]cttaggcaatactgattttggctt
ASB in cell types
SUM159PT (Triple negative breast cancer)
ASB for transcription factors
CEBPB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 2.00 -1.91 4.7·10-31.00 1.00 -0.28 Weak Concordant
Items per page:
1 – 1 of 1

Motif analysis

CEBPB_HUMAN Weak Concordant
CEBPB_HUMAN pic

Genetic associations

GTEx eQTL Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

Download