rs118064999 chr19:1017254 C>A
- Sequence
cccaggcagcctcgtccacgccca[C/A]agtaaccctccccagggagctcac
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZFHX2_HUMAN SCRT2_HUMAN ZN341_HUMAN EGR2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFHX2_HUMAN | 1.06 | n/a | 4.00 | n/a | n/a | |||
| SCRT2_HUMAN | 2.82 | -5.34 | 2.00 | n/a | No Hit | |||
| ZN341_HUMAN | 1.86 | n/a | 2.00 | n/a | No Hit | |||
| EGR2_HUMAN | 1.66 | n/a | 3.00 | -4.15 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cerebellum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Pancreas, Testis, Thyroid