rs118079028 chr10:13414971 C>T
- Sequence
ctctggacttgatcttcagaagaa[C/T]aggaagcaaggtgtttgcactgag
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN ETV5_HUMAN MIXL1_HUMAN P66A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 3.36 | n/a | 1.33 | n/a | No Hit | |||
| ETV5_HUMAN | 3.46 | -3.45 | 1.00 | -3.55 | Concordant | |||
| MIXL1_HUMAN | 2.54 | -2.58 | 1.00 | n/a | No Hit | |||
| P66A_HUMAN | 2.45 | -2.12 | 1.00 | n/a | n/a |
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Motif analysis
