rs118142163 chr10:76604 G>A
- Sequence
ccgtcctcacagtggacgccccac[G/A]ccgccgccgtgcggttcggacacg
- ASB in cell types
- K562 (myelogenous leukemia) GM19238 (female B-cells lymphoblastoid cell lines) HCT-116-RAD21-mAC
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.47 | 1.63 | 1.45 | 0.26 | Weak Concordant |
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Motif analysis
