rs118165004 chr20:64039016 C>T
- Sequence
gggtccggcactcccttcgcctgc[C/T]tctctgtgggcctaggaccgcccc
- ASB in cell types
- SEM (childhood B acute lymphoblastic leukemia) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ERG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERG_HUMAN | 1.15 | 3.12 | 1.11 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid